Degree of multicollinearity and variables involved in linear dependence in additive‑dominant models

Authors

  • Juliana Petrini Universidade de São Paulo (USP), Escola Superior de Agricultura Luiz de Queiroz
  • Raphael Antonio Prado Dias Instituto Federal de Educação, Ciência e Tecnologia – Sul de Minas Gerais
  • Simone Fernanda Nedel Pertile Universidade de São Paulo (USP), Escola Superior de Agricultura Luiz de Queiroz
  • Joanir Pereira Eler Universidade de São Paulo (USP), Faculdade de Zootecnia e Engenharia de Alimentos
  • José Bento Sterman Ferraz Universidade de São Paulo (USP), Faculdade de Zootecnia e Engenharia de Alimentos
  • Gerson Barreto Mourão Universidade de São Paulo (USP), Escola Superior de Agricultura Luiz de Queiroz

DOI:

https://doi.org/10.1590/S1678-3921.pab2012.v47.11889

Keywords:

Bos taurus x Bos indicus, animal breeding, beef cattle, correlation matrix, crossbreeding, variance inflation factor

Abstract

The objective of this work was to assess the degree of multicollinearity and to identify the variables involved in linear dependence relations in additive‑dominant models. Data of birth weight (n=141,567), yearling weight (n=58,124), and scrotal circumference (n=20,371) of Montana Tropical composite cattle were used. Diagnosis of multicollinearity was based on the variance inflation factor (VIF) and on the evaluation of the condition indexes and eigenvalues from the correlation matrix among explanatory variables. The first model studied (RM) included the fixed effect of dam age class at calving and the covariates associated to the direct and maternal additive and non‑additive effects. The second model (R) included all the effects of the RM model except the maternal additive effects. Multicollinearity was detected in both models for all traits considered, with VIF values of 1.03–70.20 for RM and 1.03–60.70 for R. Collinearity increased with the increase of variables in the model and the decrease in the number of observations, and it was classified as weak, with condition index values between 10.00 and 26.77. In general, the variables associated with additive and non‑additive effects were involved in multicollinearity, partially due to the natural connection between these covariables as fractions of the biological types in breed composition.

Author Biography

Juliana Petrini, Universidade de São Paulo (USP), Escola Superior de Agricultura Luiz de Queiroz

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Published

2013-01-22

How to Cite

Petrini, J., Dias, R. A. P., Pertile, S. F. N., Eler, J. P., Ferraz, J. B. S., & Mourão, G. B. (2013). Degree of multicollinearity and variables involved in linear dependence in additive‑dominant models. Pesquisa Agropecuaria Brasileira, 47(12), 1743–1750. https://doi.org/10.1590/S1678-3921.pab2012.v47.11889

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Section

GENETICS